pubmed MCP servers & tools

Comprehensive PubMed MCP Server to search, retrieve, and analyze biomedical literature from NCBI.

An MCP server that provides access to medical information, drug databases, and healthcare resources. Enables AI assistants to query medical data, drug interactions, and clinical guidelines.

Biomedical research server providing access to PubMed, ClinicalTrials.gov, and MyVariant.info.

PubMed literature search and US/UK drug labelling for AI assistants.

MCP to search and read medical / life sciences papers from PubMed.

NCBI E-utilities — federated Entrez search/fetch (PubMed/Gene/Nucleotide/…)

NLM MeSH (Medical Subject Headings) MCP.

Comprehensive NCBI/PubMed literature search server with advanced analytics, caching, MeSH integration, related articles discovery, and batch processing for all life sciences and biomedical research.

Clinical research MCP server for trial coordinators and life sciences teams. Real-time access to PubMed (35M+ papers) and ClinicalTrials.gov (400K+ trials). No API key required.

Search PubMed and summarize biomedical literature, designed for AI health agents.

LLM-assisted biomedical literature screening and extraction for PubMed, GEO, and preprints.

PubMed MCP — wraps the NCBI E-utilities API (biomedical literature, free, no auth)

Official public, read-only Model Context Protocol server from Helena Bioinformatics for biomedical literature discovery. Agents can search PubMed and scholarly research, resolve PMID, DOI, and PMCID identifiers, inspect publication metadata, find related papers, traverse bounded citation graphs, explore semantic literature neighborhoods, and check corpus coverage. Use the hosted Streamable HTTP endpoint https://api.helena.bio/noodle/v1/mcp; no npm or npx package is required.

Auditable MCP server for PubMed, Europe PMC, ClinicalTrials.gov, and bioRxiv/medRxiv queries

MCP server for ClinicalTrials.gov, PubMed, FDA drug labels, FAERS, and ICH guidelines.

PubTator 3 MCP — biomedical entity search, literature search with entity

Read-only UK women's midlife health guidance: search, PubMed-backed evidence, supplement picks.