Pharma MCP

MCP server for ClinicalTrials.gov, PubMed, FDA drug labels, FAERS, and ICH guidelines.

Quick Install

Automated & IDE Setup

Copy the AI prompt to install this server into Claude Code, Cursor, or another agent — or use 1-click editor setup below.

Add to Cursor Add to VS Code

Manual Client & Custom JSON ConfigExpand JSON ▾

Client Config & Setup

Choose your client or environment

Target File:~/Library/Application Support/Claude/claude_desktop_config.json

claude_desktop_config.json

{
  "mcpServers": {
    "pharma-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "pharma-mcp"
      ]
    }
  }
}

💡 Paste the JSON block into your client's configuration file under mcpServers, then restart the application.

Documentation Overview

pharma-mcp

MCP server for clinical and pharmaceutical data.

Gives Claude and any MCP-compatible AI agent direct access to:

ClinicalTrials.gov — search and retrieve trial protocols, endpoints, eligibility criteria
PubMed — literature search with MeSH terms, full abstracts, citation formatting
FDA openFDA — drug labels, approved indications, warnings, boxed warnings
FDA FAERS — adverse event reports with patient demographics and outcomes
ICH Guidelines — structured summaries of E3, E6, E9, M4, Q1A, and more

No API keys required. All data sources are public. Runs locally in under 60 seconds.

Tools

Tool	Description
`search_clinical_trials`	Search ClinicalTrials.gov by condition, drug, or sponsor
`get_trial_details`	Full protocol details by NCT ID
`search_pubmed`	PubMed literature search with MeSH, Boolean, date filters
`get_pubmed_abstract`	Full abstract + metadata by PMID
`search_fda_drugs`	FDA drug label search — indications, warnings, dosage forms
`get_fda_adverse_events`	FAERS adverse event reports by drug and/or reaction
`get_ich_guideline`	ICH guideline summaries by code (E3, E6, M4…) or topic
`format_citation`	Vancouver, APA, or AMA citation from a PMID

Quickstart

Install

bash

git clone https://github.com/pubspro/pharma-mcp.git
cd pharma-mcp
npm install

Add to Claude Desktop

Edit ~/Library/Application Support/Claude/claude_desktop_config.json (macOS) or %APPDATA%\Claude\claude_desktop_config.json (Windows):

config.json

{
  "mcpServers": {
    "pharma-mcp": {
      "command": "node",
      "args": ["/absolute/path/to/pharma-mcp/src/index.js"]
    }
  }
}

Restart Claude Desktop. The tools appear automatically.

Add to Claude Code

Terminal

claude mcp add pharma-mcp node /absolute/path/to/pharma-mcp/src/index.js

Example prompts

Once connected, ask Claude:

Code

Search ClinicalTrials.gov for Phase 3 recruiting trials for non-small cell lung cancer involving osimertinib.

Code

Find the 10 most recent PubMed papers on GLP-1 receptor agonists and cardiovascular outcomes. Format citations in Vancouver style.

Code

Get the FDA label for semaglutide — what are the boxed warnings and contraindications?

Code

What does ICH E3 require for a clinical study report? Which sections are mandatory?

Code

Pull adverse event reports for dupilumab involving anaphylaxis from FAERS.

Use cases

Medical writers and publications teams

Rapid literature gap analysis for advisory boards and manuscripts
Auto-format reference lists from PubMed searches
Check ICH E3 requirements mid-draft without switching tabs

Regulatory affairs

Search FDA labels for labeling precedent
Check FAERS signal for benefit-risk narratives
Retrieve ICH guideline requirements for CTD modules

Clinical development

Competitive landscape searches across ClinicalTrials.gov
Identify comparable trial designs and endpoints

AI agent pipelines

Chain pharma-mcp tools with other MCP servers for autonomous regulatory research workflows

Data sources

All data retrieved in real time from official public APIs — no data stored, no API keys required:

Requirements

Node.js 18+
npm

Roadmap

EMA EPAR search
DailyMed full prescribing information
GPP4 / ICMJE authorship criteria checker
ClinVar genetic variant lookup

PRs and issues welcome.

License

MIT

Read the full README →View source on GitHub →

Related MCP Servers

View all in Developer Tools View all alternatives

Reviews

No reviews yet — be the first to share how this listing worked for you.

Frequently Asked Questions about Pharma MCP

Add the following block to your claude_desktop_config.json under mcpServers: "mcpServers": { "pharma-mcp": { "command": "npx", "args": ["-y", "pharma-mcp"] } }

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Technical Specs & Signals

CategoryDeveloper Tools

27Quality signal: Emerging · 27/100How this signal is calculated ▾

Server availabilityNot measured

Not scored for repo-hosted servers — we can't reach the running server, only its GitHub page. Hosted MCP endpoints are health-checked live.

Verified ownership8/20

Documentation & tools11/30

Adoption & activity1/15

Community engagement0/10

A guidance signal from public completeness & health data — not a user rating. New listings start lower and rise as they add docs, get verified, and grow adoption. Signals we can't observe for a listing are skipped, not counted against it.

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More in 💻 Developer Tools →Best MCP servers for Developers →Alternatives to Pharma MCP →Install in Claude Desktop Install in Cursor Install in VS Code

Pharma MCP

MCP server for ClinicalTrials.gov, PubMed, FDA drug labels, FAERS, and ICH guidelines.

Quick Install

Automated & IDE Setup

Copy the AI prompt to install this server into Claude Code, Cursor, or another agent — or use 1-click editor setup below.

Add to Cursor Add to VS Code

Manual Client & Custom JSON ConfigExpand JSON ▾

Client Config & Setup

Choose your client or environment

Target File:~/Library/Application Support/Claude/claude_desktop_config.json

claude_desktop_config.json

{
  "mcpServers": {
    "pharma-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "pharma-mcp"
      ]
    }
  }
}

💡 Paste the JSON block into your client's configuration file under mcpServers, then restart the application.

Documentation Overview

pharma-mcp

MCP server for clinical and pharmaceutical data.

Gives Claude and any MCP-compatible AI agent direct access to:

ClinicalTrials.gov — search and retrieve trial protocols, endpoints, eligibility criteria
PubMed — literature search with MeSH terms, full abstracts, citation formatting
FDA openFDA — drug labels, approved indications, warnings, boxed warnings
FDA FAERS — adverse event reports with patient demographics and outcomes
ICH Guidelines — structured summaries of E3, E6, E9, M4, Q1A, and more

No API keys required. All data sources are public. Runs locally in under 60 seconds.

Tools

Tool	Description
`search_clinical_trials`	Search ClinicalTrials.gov by condition, drug, or sponsor
`get_trial_details`	Full protocol details by NCT ID
`search_pubmed`	PubMed literature search with MeSH, Boolean, date filters
`get_pubmed_abstract`	Full abstract + metadata by PMID
`search_fda_drugs`	FDA drug label search — indications, warnings, dosage forms
`get_fda_adverse_events`	FAERS adverse event reports by drug and/or reaction
`get_ich_guideline`	ICH guideline summaries by code (E3, E6, M4…) or topic
`format_citation`	Vancouver, APA, or AMA citation from a PMID

Quickstart

Install

bash

git clone https://github.com/pubspro/pharma-mcp.git
cd pharma-mcp
npm install

Add to Claude Desktop

Edit ~/Library/Application Support/Claude/claude_desktop_config.json (macOS) or %APPDATA%\Claude\claude_desktop_config.json (Windows):

config.json

{
  "mcpServers": {
    "pharma-mcp": {
      "command": "node",
      "args": ["/absolute/path/to/pharma-mcp/src/index.js"]
    }
  }
}

Restart Claude Desktop. The tools appear automatically.

Add to Claude Code

Terminal

claude mcp add pharma-mcp node /absolute/path/to/pharma-mcp/src/index.js

Example prompts

Once connected, ask Claude:

Code

Search ClinicalTrials.gov for Phase 3 recruiting trials for non-small cell lung cancer involving osimertinib.

Code

Find the 10 most recent PubMed papers on GLP-1 receptor agonists and cardiovascular outcomes. Format citations in Vancouver style.

Code

Get the FDA label for semaglutide — what are the boxed warnings and contraindications?

Code

What does ICH E3 require for a clinical study report? Which sections are mandatory?

Code

Pull adverse event reports for dupilumab involving anaphylaxis from FAERS.

Use cases

Medical writers and publications teams

Rapid literature gap analysis for advisory boards and manuscripts
Auto-format reference lists from PubMed searches
Check ICH E3 requirements mid-draft without switching tabs

Regulatory affairs

Search FDA labels for labeling precedent
Check FAERS signal for benefit-risk narratives
Retrieve ICH guideline requirements for CTD modules

Clinical development

Competitive landscape searches across ClinicalTrials.gov
Identify comparable trial designs and endpoints

AI agent pipelines

Chain pharma-mcp tools with other MCP servers for autonomous regulatory research workflows

Data sources

All data retrieved in real time from official public APIs — no data stored, no API keys required:

Requirements

Node.js 18+
npm

Roadmap

EMA EPAR search
DailyMed full prescribing information
GPP4 / ICMJE authorship criteria checker
ClinVar genetic variant lookup

PRs and issues welcome.

License

MIT

Read the full README →View source on GitHub →

Related MCP Servers

View all in Developer Tools View all alternatives

Reviews

No reviews yet — be the first to share how this listing worked for you.

Frequently Asked Questions about Pharma MCP

Add the following block to your claude_desktop_config.json under mcpServers: "mcpServers": { "pharma-mcp": { "command": "npx", "args": ["-y", "pharma-mcp"] } }

AllMCPs Directory Badge

Full Badge Customizer

Showcase your server listing on GitHub or your project documentation. Embed this dynamic SVG badge to highlight official listing status and live engagement.

Badge Style:

Live Dynamic SVG Preview

Markdown (GitHub README)

[![AllMCPs](https://allmcps.com/api/badge/pharma-mcp?style=directory)](https://allmcps.com/mcp/pharma-mcp)

HTML Embed

<a href="https://allmcps.com/mcp/pharma-mcp"><img src="https://allmcps.com/api/badge/pharma-mcp?style=directory" alt="Pharma MCP on AllMCPs" /></a>

Technical Specs & Signals

CategoryDeveloper Tools

27Quality signal: Emerging · 27/100How this signal is calculated ▾

Server availabilityNot measured

Not scored for repo-hosted servers — we can't reach the running server, only its GitHub page. Hosted MCP endpoints are health-checked live.

Verified ownership8/20

Documentation & tools11/30

Adoption & activity1/15

Community engagement0/10

★ Featured

AllMCPs Server

Explore Server →

Own this project?

Free dofollow backlink: add your website and place the AllMCPs badge on it — no claim needed. We detect it automatically and keep it verified as long as the badge stays live.

Claim & get free dofollow

Share & Embed

Add our SVG badge (dark/light directory styles) or embeddable widget to your site.

Explore more

More in 💻 Developer Tools →Best MCP servers for Developers →Alternatives to Pharma MCP →Install in Claude Desktop Install in Cursor Install in VS Code