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bioinformatics MCP Servers

Showing 19 Model Context Protocol tools tagged with “bioinformatics”.

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Biothings MCP

longevity-genie

Biology, Medicine and Bioinformatics

MCP server to interact with the BioThings API, including genes, genetic variants, drugs, and taxonomic information.

Biorobotics

SEOSiri-Official

Biology, Medicine and Bioinformatics

A stateless, deterministic Bio-Robotics Core Engine converting biological data (UniProt API) to Cartesian G-code coordinates using the Model Context Protocol. 🐍 🏠 🍎 🪟 🐧

Gph MCP Server

Biology, Medicine and Bioinformatics

Healthcare service vendor matching for medical practices: 76,000+ curated vendors across 25 categories (billing, credentialing, EHR, compliance, legal) in all 50 US states.

Ucsc Genome MCP

Biology, Medicine and Bioinformatics

MCP server to interact with the UCSC Genome Browser API, letting you find genomes, chromosomes, and more.

Opengenes MCP

longevity-genie

Biology, Medicine and Bioinformatics

MCP server for a queryable database for aging and longevity research from the OpenGenes project.

Synergy Age MCP

longevity-genie

Biology, Medicine and Bioinformatics

MCP server for the SynergyAge database of synergistic and antagonistic genetic interactions in longevity.

Plant Genomics MCP

Biology, Medicine and Bioinformatics

32 tools for plant-genomics locus lookup across 11 public backends (Ensembl Plants, Phytozome, UniProtKB, KEGG, STRING-DB, Gramene, Europe PMC, QuickGO, NCBI BLAST, ATTED-II, BAR). Single-locus, parallel-batch, and cross-source synthesis variants; JSON output schemas and EDAM ontology tags on every tool. pipx install plant-genomics-mcp.

MCP TechTrend

Biology, Medicine and Bioinformatics

Multi-source academic + code + medical-regulatory trend monitoring (arXiv, PubMed, GitHub, Hugging Face, openFDA 510(k)/Recalls). Newspaper-style briefings, per-domain tuning, sandbox-safe Python launcher.

Uniprot MCP

Biology, Medicine and Bioinformatics

Auditable UniProt MCP server: 41 tools over the UniProt knowledgebase (entries, features, variants, PTMs, GO terms, cross-references) with per-query SHA-256 provenance and offline replay. uvx uniprot-mcp-server

Apple Health MCP Server

Biology, Medicine and Bioinformatics

An MCP server that provides access to exported data from Apple Health. Data analytics included.

Encode Toolkit

Biology, Medicine and Bioinformatics

MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments.

Wellness Cgm MCP

Biology, Medicine and Bioinformatics

Local-first continuous glucose monitor MCP server for Dexcom Developer API and FreeStyle Libre via LibreLink Up.

Gget MCP

longevity-genie

Biology, Medicine and Bioinformatics

MCP server providing a powerful bioinformatics toolkit for genomics queries and analysis, wrapping the popular gget library.

Lecka MCP

Biology, Medicine and Bioinformatics

Race nutrition planning for endurance athletes. Calculates carb, sodium and fluid targets for marathons, ultras, cycling and triathlons. Returns personalised Lecka product recommendations by race type, conditions and athlete weight.

Heor Agent MCP

Biology, Medicine and Bioinformatics

HEOR (Health Economics and Outcomes Research) MCP server with 7 tools for literature search across 41 medical data sources (PubMed, NICE, CADTH, ICER, etc.), cost-effectiveness modeling (Markov/PartSA/PSA), and HTA dossier preparation for pharmaceutical and biotech teams.

Oura MCP

Biology, Medicine and Bioinformatics

Ask your Oura Ring about sleep, readiness, activity, stress and heart rate in ChatGPT or Claude, in any language. Read-only, token-efficient, self-hosted; 10 task-oriented tools grouped by how people actually ask.

ChatSpatial

Biology, Medicine and Bioinformatics

MCP server for spatial transcriptomics analysis with 60+ integrated methods covering cell annotation, deconvolution, spatial statistics, and visualization.

Onekgpd MCP

Biology, Medicine and Bioinformatics

real-time access to 1000 Genomes Project dataset

Enrichr MCP Server

Search & Data Extraction

A MCP server that provides gene set enrichment analysis using the Enrichr API

bioinformatics MCP Servers & Tools | AllMCPs