Mirobody vs Puumed

A side-by-side look at the Mirobody and Puumed MCP servers: transport, auth, tools, quality signals, and the config to install either one in Claude, Cursor, Windsurf or VS Code.

Mirobody logoMirobodyBiology & BioinformaticsTurn scattered health data into answers you can trace. Self-hosted AI health data engine for lab reports, wearables and genetics, with a built-in MCP server. Run it with Docker and one LLM key, or keep every model local on llama.cpp.51GoodAuth: not declaredPuumed logoPuumedBiology & Bioinformatics · Local subprocess (stdio)PubMed MCP — wraps the NCBI E-utilities API (biomedical literature, free, no auth)40FairAuth: not declared

Verdict: choose Mirobody for biology & bioinformatics work; choose Puumed for biology & bioinformatics as a local process. You can also run both side by side in one mcpServers block.

Which MCP server should you choose?

Mirobody logoChoose Mirobody when

  • You need dedicated capabilities in the Biology & Bioinformatics domain.
Explore Mirobody

Puumed logoChoose Puumed when

  • You need dedicated capabilities in the Biology & Bioinformatics domain.
  • You prefer a local stdio subprocess transport.
Explore Puumed

Feature & specification comparison

Rows where the two servers differ are marked.

SpecMirobody logoMirobodyPuumed logoPuumed
CategoryBiology & BioinformaticsBiology & Bioinformatics
Quality signal51/100 · Good40/100 · Fair
Install commandNot confirmed yetConfirmed
Transport—Local subprocess (stdio)
AuthNot declaredNot declared
PricingBYOK (pay the provider)Not declared
Required env varsNone listedNone listed
Verified ownerCommunity listingCommunity listing
GitHub stars1,3881
Directory activity 2 views 0 installs 0 upvotes 2 views 0 installs 0 upvotes
ToolsNot listedNot listed

Tools & capabilities

Mirobody tools

No tool names declared yet. Check the project README from the listing page.

Puumed tools

No tool names declared yet. Check the project README from the listing page.

Ready-to-paste client configs

Paste either block (or both) into your client config, e.g. claude_desktop_config.json or ~/.cursor/mcp.json. We only show a config when the install command is confirmed.

Mirobody

No confirmed install command for Mirobody yet — follow the setup steps linked from its listing page rather than a guessed package name.

Puumed

mcpServers (Claude Desktop / Cursor)
{
  "mcpServers": {
    "puumed": {
      "command": "npx",
      "args": [
        "-y",
        "@pipeworx/mcp-pubmed"
      ]
    }
  }
}

Frequently asked questions

Mirobody is categorized under Biology & Bioinformatics and uses an install path we have not confirmed yet. Puumed belongs to Biology & Bioinformatics and uses a local stdio subprocess. Pick Mirobody for biology & bioinformatics work and Puumed for biology & bioinformatics.

Copy the mcpServers block from the config section on this page into your client's config (for example claude_desktop_config.json or ~/.cursor/mcp.json), then fully restart the client. Mirobody has no confirmed install command yet — follow its own setup instructions.

Mirobody is bring-your-own-key: usage is billed by the API provider you supply a key for. Puumed has no declared pricing — check the project's own site. If a server needs environment variables such as API keys, define them under the env key in your client's MCP config.

Yes. MCP clients support multiple servers: add mirobody and puumed as separate keys in the same mcpServers object, and your assistant will call tools from either one.

On AllMCPs, Mirobody has a quality signal of 51/100 (Good) with 2 views, 0 installs and 1,388 GitHub stars. Puumed has 40/100 (Fair) with 2 views, 0 installs and 1 GitHub stars.