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  1. Home
  2. 🧬 Biology & Bioinformatics
  3. Fhirfly MCP Server
Fhirfly MCP Server logo
Health: ActiveRecent health check succeeded.Last checked 9/22/2026, 10:02:11 AM

Fhirfly MCP Server

User RatingsBe the first to rate and review this MCP server! Enrichment pendingWe haven’t run our AI enrichment pass on this listing yet, so the overview, use cases, and FAQ below may be sparse or missing. We work through the catalog over time β€” check back soon.
View RepositoryVisit Website

Healthcare reference data: drugs, providers, diagnoses, labs, vaccines, and claims via 28 tools.

Quick Install

Automated & IDE Setup

Copy the AI prompt to install this server into Claude Code, Cursor, or another agent β€” or use 1-click editor setup below.

Add to CursorAdd to VS Code
Not yet automatically verified

We haven't yet run this listing's install command through our automated sandbox check. This isn't a red flag β€” we're steadily working through the catalog.

Manual Client & Custom JSON ConfigExpand JSON β–Ύ

Client Config & Setup

Choose your client or environment
Target File:~/Library/Application Support/Claude/claude_desktop_config.json
claude_desktop_config.json
{
  "mcpServers": {
    "mcp-server-57": {
      "command": "npx",
      "args": [
        "-y",
        "@fhirfly-io/mcp-server"
      ]
    }
  }
}

πŸ’‘ Paste the JSON block into your client's configuration file under mcpServers, then restart the application.

Install Tool Schemas (64) Directory Badge Claim listing Alternatives🧬 More in Biology & Bioinformatics

Capabilities & Tool Schemas (64) ~738 tokensApproximate context cost of this server’s tool schemas (~4 chars/token), before any tool is called. Actual usage depends on your client and model.Self-reported Self-reportedParsed from the repository README, not verified against a live server β€” may be incomplete or out of date.

Inspect callable tools, capabilities, and parameters exposed to AI agents by Fhirfly MCP Server.

ndc_get

Look up drug by NDC code

ndc_search

Search drugs by name, ingredient, etc.

npi_get

Look up provider by NPI number

npi_search

Search providers by name, specialty, location

rxnorm_get

Look up drug by RxCUI

rxnorm_search

Search drug terminology

Documentation Overview

@fhirfly-io/mcp-server

MCP (Model Context Protocol) server for connecting Claude Desktop to FHIRfly healthcare reference data APIs.

What is this?

This package lets Claude Desktop look up real healthcare reference data including:

  • NDC - Drug products and packages (FDA)
  • NPI - Healthcare provider identifiers (CMS)
  • RxNorm - Drug terminology (NLM)
  • LOINC - Laboratory codes (Regenstrief Institute)
  • ICD-10 - Diagnosis and procedure codes (CMS)
  • CVX/MVX - Vaccine codes (CDC)
  • FDA Drug Labels - Prescribing information
  • SNOMED CT - Clinical concepts (IPS free set)
  • HCC - CMS Hierarchical Condition Category risk adjustment mappings
  • OPCS-4 - UK NHS procedure classification codes
  • dm+d - UK Dictionary of Medicines and Devices (NHS)
  • UCUM - Unified Code for Units of Measure (NLM)
  • RxClass - Drug classification hierarchy (NLM)
  • HCPCS - Level II procedure and supply codes (CMS)
  • MS-DRG - Diagnosis Related Groups for inpatient payment (CMS)
  • POS - Place of Service codes for claims submission (CMS)
  • J-Code/NDC Crosswalk - Bidirectional HCPCS J-code to NDC mapping (CMS)
  • DDI Reference β€” Drug-drug interaction text from FDA labels + RxNorm enrichment
  • Connectivity - Provider FHIR endpoints and Direct addresses
  • SMA - State Medicaid Agency FHIR endpoint directory (CMS)
  • Claims Intelligence - NCCI edits, MUE limits, PFS/RVU data, coverage determinations

When you ask Claude about medications, providers, or clinical codes, it can look up accurate, current information instead of relying on training data.

Prerequisites

  1. Claude Desktop - Download from claude.ai/download
  2. Node.js 18+ - Download from nodejs.org
  3. FHIRfly API Key - Get one at fhirfly.io (free tier available)

Quick Setup

Step 1: Get a FHIRfly API Key

  1. Go to fhirfly.io and sign up
  2. Navigate to Dashboard > Credentials
  3. Click Create Credential and select MCP (Claude Desktop)
  4. Copy your API key (starts with ffly_)

Step 2: Configure Claude Desktop

Find your Claude Desktop config file:

  • macOS: ~/Library/Application Support/Claude/claude_desktop_config.json
  • Windows: %APPDATA%\Claude\claude_desktop_config.json

Add the FHIRfly server configuration:

config.json
{
  "mcpServers": {
    "fhirfly": {
      "command": "npx",
      "args": ["-y", "@fhirfly-io/mcp-server"],
      "env": {
        "FHIRFLY_API_KEY": "ffly_live_your_key_here"
      }
    }
  }
}

Replace ffly_live_your_key_here with your actual API key.

Step 3: Restart Claude Desktop

Completely quit Claude Desktop and reopen it. The FHIRfly tools should now be available.

Verify It Works

Try asking Claude:

  • "What is NDC 0069-0151-01?"
  • "Look up NPI 1234567893"
  • "Search for COVID vaccines in the CVX database"
  • "What are the drug interactions for Lipitor?"
  • "Which states have implemented Medicaid FHIR endpoints?"
  • "Show me the FHIR endpoint details for California's Medicaid program"
  • "What is the UCUM code for milligrams per deciliter?"
  • "Convert 100 mg to grams"
  • "What drugs are in the HMG-CoA Reductase Inhibitors class?"
  • "Check interactions between aspirin and warfarin"

Claude should use the FHIRfly tools to look up real data.

Available Tools

ToolDescription
ndc_getLook up drug by NDC code
ndc_searchSearch drugs by name, ingredient, etc.
npi_getLook up provider by NPI number
npi_searchSearch providers by name, specialty, location
rxnorm_getLook up drug by RxCUI
rxnorm_searchSearch drug terminology
loinc_getLook up lab test by LOINC code
loinc_searchSearch lab codes
icd10_getLook up diagnosis/procedure code
icd10_searchSearch ICD-10 codes
cvx_getLook up vaccine by CVX code
cvx_searchSearch vaccine codes
mvx_getLook up vaccine manufacturer
mvx_searchSearch manufacturers
fda_label_lookupLook up FDA drug label
fda_label_searchSearch drug labels
fda_label_safetyGet safety info (boxed warnings, contraindications)
fda_label_interactionsGet drug interaction info
fda_label_dosingGet dosing information
fda_label_sectionsGet specific label sections
snomed_getLook up clinical concept by SNOMED CT ID
snomed_searchSearch SNOMED CT IPS concepts
snomed_mappingsFind cross-terminology mappings for a SNOMED concept
npi_connectivityLook up provider connectivity (FHIR endpoints)
sma_list_statesList states with Medicaid FHIR endpoint status
sma_get_stateGet SMA FHIR endpoint details for a state
sma_statsGet aggregate SMA implementation statistics
ncci_validateCheck if two codes can be billed together (NCCI)
mue_lookupLook up max units of service (MUE limits)
pfs_lookupLook up Medicare fee schedule / RVU data
coverage_checkCheck LCD/NCD coverage determinations
HCPCS / MS-DRG / POS / J-Code Tools
hcpcs_getLook up an HCPCS Level II procedure/supply code
hcpcs_modifier_getLook up an HCPCS modifier code
hcpcs_searchSearch HCPCS Level II codes
msdrg_getLook up an MS-DRG code
msdrg_searchSearch MS-DRG codes
pos_getLook up a Place of Service code
jcode_by_hcpcsFind NDCs mapped to a J-code/HCPCS code
jcode_by_ndcFind HCPCS codes mapped to an NDC
HCC / OPCS-4 Tools
hcc_getLook up HCC risk adjustment mappings for an ICD-10 code
hcc_reverseFind all ICD-10 codes mapping to a given HCC category
hcc_searchSearch the HCC crosswalk by code, model, or category
opcs4_getLook up an OPCS-4 UK NHS procedure code
opcs4_searchSearch OPCS-4 procedure codes
dm+d Tools
dmd_getLook up a UK dm+d medicine/device by SNOMED code
dmd_searchSearch UK dm+d medicines and devices
UCUM Tools
ucum_getLook up a UCUM unit code (e.g., mg, mL, kg/m2)
ucum_searchSearch units of measure by name or description
ucum_validateValidate a UCUM expression for correctness
ucum_convertConvert a value between compatible UCUM units
RxClass Tools
rxclass_getLook up a drug class by class ID
rxclass_searchSearch drug classifications by name or type
rxclass_membersList drugs belonging to a drug class
DDI Tools
check_drug_interactionsCheck drug-drug interactions for multiple drugs (FDA label text + RxNorm)
Batch Tools
ndc_batchLook up multiple NDC codes (max 500)
npi_batchLook up multiple NPI numbers (max 100)
icd10_batchLook up multiple ICD-10 codes (max 100)
rxnorm_batchLook up multiple RxCUIs (max 100)
loinc_batchLook up multiple LOINC codes (max 100)
cvx_batchLook up multiple CVX codes (max 100)
mvx_batchLook up multiple MVX codes (max 100)
fda_label_batchLook up multiple FDA labels (max 50)

Configuration Options

Environment VariableDescriptionDefault
FHIRFLY_API_KEYYour FHIRfly API key (required)-
FHIRFLY_API_URLAPI base URLhttps://api.fhirfly.io
FHIRFLY_DEBUGEnable debug logging (1 or true)false
FHIRFLY_TIMEOUTFetch timeout in milliseconds30000

Troubleshooting

"FHIRFLY_API_KEY environment variable is required"

Your API key isn't configured. Make sure:

  1. You have a valid API key from fhirfly.io
  2. It's set in the env section of your Claude Desktop config
  3. The key starts with ffly_

"Invalid API key format"

FHIRfly API keys start with ffly_. Check that you copied the full key.

"Authentication failed"

Your API key may be invalid or expired. Generate a new one at fhirfly.io/dashboard/credentials.

Claude doesn't show FHIRfly tools

  1. Make sure you completely quit and restarted Claude Desktop
  2. Check your config file syntax (must be valid JSON)
  3. Enable debug mode to see what's happening:
config.json
{
  "mcpServers": {
    "fhirfly": {
      "command": "npx",
      "args": ["-y", "@fhirfly-io/mcp-server"],
      "env": {
        "FHIRFLY_API_KEY": "your_key",
        "FHIRFLY_DEBUG": "1"
      }
    }
  }
}

"Rate limit exceeded"

You've hit your plan's rate limit. Wait a moment and try again, or upgrade your plan at fhirfly.io.

How It Works

Code
β”Œβ”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”     β”Œβ”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”     β”Œβ”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”
β”‚  Claude Desktop │────▢│  This Package   │────▢│  FHIRfly API    β”‚
β”‚                 β”‚     β”‚  (runs locally) β”‚     β”‚  (cloud)        β”‚
β”‚  "What is       │◀────│                 │◀────│                 β”‚
β”‚   NDC 123..."   β”‚     β”‚  Translates MCP β”‚     β”‚  Returns drug   β”‚
β”‚                 β”‚     β”‚  ↔ HTTPS        β”‚     β”‚  data           β”‚
β””β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”˜     β””β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”˜     β””β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”€β”˜

This package runs on your computer as a bridge between Claude Desktop and the FHIRfly API. It:

  1. Receives requests from Claude Desktop via stdin
  2. Translates them to HTTPS requests to FHIRfly
  3. Returns the results to Claude via stdout

Your API key is sent to FHIRfly over HTTPS. No healthcare data is stored locally.

Links

  • FHIRfly Documentation
  • MCP Setup Guide
  • Get an API Key
  • Report Issues

Data Sources & Licensing

Read the full README β†’View source on GitHub β†’

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Adoption & maintenance

Factual signals from GitHub, npm, and our automated checks β€” not a rating.

npm downloads
590
Package downloads in the last 30 days.
Last commit
13d ago
Most recent push to the default branch.
Tools exposed
64
Callable tools this server registers over MCP.

Reviews

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Frequently Asked Questions about Fhirfly MCP Server

Add the following block to your claude_desktop_config.json under mcpServers: "mcpServers": { "fhirfly-mcp-server": { "command": "npx", "args": ["-y","@fhirfly-io/mcp-server"] } }

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Technical Specs & Signals

Category🧬Biology & Bioinformatics
More technical detailsExpand β–Ύ
TransportSTDIO
RuntimeNode.js
Last updatedSep 11, 2026
11/12 checks healthy over the last 46d
Views0
Unique ViewsTotal visits recorded for this listing page on AllMCPs.
Installs0
Installs & Copy ActionsTotal times users copied install commands or configuration snippets for this server.
GitHub stars0
GitHub Star CountTotal stargazers on GitHub representing community popularity (0 stars).
Last commit13d ago
Last Repository CommitThe most recent commit or push recorded for this server's GitHub repository.Last commit on Sep 11, 2026
npm downloads590/mo
Monthly npm DownloadsAverage monthly package installs recorded from npm registry statistics.
56Quality signal: Good Β· 56/100How this signal is calculated β–Ύ
Server availabilityNot measured

Not scored for repo-hosted servers β€” we can't reach the running server, only its GitHub page. Hosted MCP endpoints are health-checked live.

Verified ownership10/20
Documentation & tools25/30
Adoption & activity7/15
Community engagement0/10

A guidance signal from public completeness & health data β€” not a user rating. New listings start lower and rise as they add docs, get verified, and grow adoption. Signals we can't observe for a listing are skipped, not counted against it.

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Scanned 2d ago via OSV.dev Β· @fhirfly-io/mcp-server (npm)

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