Togomcp vs Interpro
A side-by-side look at the Togomcp and Interpro MCP servers: transport, auth, tools, quality signals, and the config to install either one in Claude, Cursor, Windsurf or VS Code.
T
TogomcpBiology & BioinformaticsMCP server for life-science knowledge graphs29EmergingAuth: api key requiredVerdict: choose Togomcp for biology & bioinformatics work; choose Interpro for biology & bioinformatics as a local process. You can also run both side by side in one mcpServers block.
Which MCP server should you choose?
TChoose Togomcp when
- You need dedicated capabilities in the Biology & Bioinformatics domain.
- Its auth model fits you: API key required.
- You have the keys it needs:
NCBI_API_KEY.
Choose Interpro when
- You need dedicated capabilities in the Biology & Bioinformatics domain.
- You prefer a local stdio subprocess transport.
- You want tools like
search_entries, get_entry, entries_for_protein.
Feature & specification comparison
Rows where the two servers differ are marked.
| Spec | T Togomcp | |
|---|---|---|
| Category | Biology & Bioinformatics | Biology & Bioinformatics |
| Quality signal | 29/100 · Emerging | 53/100 · Good |
| Install command | Not confirmed yet | Confirmed |
| Transport | — | Local subprocess (stdio) |
| Auth | API key required | Not declared |
| Pricing | Not declared | Not declared |
| Required env vars | NCBI_API_KEY | None listed |
| Verified owner | Community listing | Community listing |
| GitHub stars | 19 | 0 |
| Directory activity | 0 views 0 installs 0 upvotes | 0 views 0 installs 0 upvotes |
| Tools | Not listed | 3 |
| Full listing | View Togomcp | View Interpro |
Tools & capabilities
Togomcp tools
No tool names declared yet. Check the project README from the listing page.
Interpro tools 3
search_entriesSearch InterPro for protein families, domains, repeats and functional sites by keyword (text search over entry names/accessions). InterPro is EBI's integrated protein-signature classification (Pfam, PROSITE, SMART, CDD, PANTHER, ...). Returns matching entries with accession (IPRxxxxxx), name, type…get_entryGet full details for a single InterPro entry by accession (e.g. "IPR000001"). Returns the entry name, type, a plain-text description, member-signature/protein counters, and associated GO terms (molecular function / biological process / cellular component). Use after search_entries or entries_for_pr…entries_for_proteinList all InterPro entries (families, domains, sites) found on a given UniProt protein, by UniProt accession (e.g. "P12345"). Returns each matching InterPro signature with accession, name and type. Useful to functionally annotate a protein. Complements UniProt/AlphaFold. Keyless.
Ready-to-paste client configs
Paste either block (or both) into your client config, e.g. claude_desktop_config.json or ~/.cursor/mcp.json. We only show a config when the install command is confirmed.
Togomcp
No confirmed install command for Togomcp yet — follow the setup steps linked from its listing page rather than a guessed package name.
Interpro
{
"mcpServers": {
"interpro": {
"command": "npx",
"args": [
"-y",
"@pipeworx/mcp-interpro"
]
}
}
}
Frequently asked questions
Togomcp is categorized under Biology & Bioinformatics and uses an install path we have not confirmed yet. Interpro belongs to Biology & Bioinformatics and uses a local stdio subprocess. Pick Togomcp for biology & bioinformatics work and Interpro for biology & bioinformatics.
Copy the mcpServers block from the config section on this page into your client's config (for example claude_desktop_config.json or ~/.cursor/mcp.json), then fully restart the client. Togomcp has no confirmed install command yet — follow its own setup instructions.
Togomcp has no declared pricing — check the project's own site. Auth: api key required. Interpro has no declared pricing — check the project's own site. If a server needs environment variables such as API keys, define them under the env key in your client's MCP config.
Yes. MCP clients support multiple servers: add togomcp and interpro as separate keys in the same mcpServers object, and your assistant will call tools from either one.
On AllMCPs, Togomcp has a quality signal of 29/100 (Emerging) with 0 views, 0 installs and 19 GitHub stars. Interpro has 53/100 (Good) with 0 views, 0 installs and 0 GitHub stars.