Atlassian MCP Server vs Github Private

A side-by-side look at the Atlassian MCP Server and Github Private MCP servers: transport, auth, tools, quality signals, and the config to install either one in Claude, Cursor, Windsurf or VS Code.

Atlassian MCP Server logoAtlassian MCP ServerVersion Control · Remote HTTP/SSEOfficial remote MCP server for Atlassian. Securely connect Jira, Confluence, Jira Service Management, Bitbucket, and Compass to Claude, ChatGPT, Cursor, VS Code, and other AI tools using OAuth 2.1 or API tokens.80ExcellentAuth: otherGithub Private logoGithub PrivateVersion Control · Local subprocess (stdio)GitHub Private MCP Pack — access private repos, org data via OAuth.60GoodAuth: not declared

Verdict: choose Atlassian MCP Server for version control work over a hosted endpoint; choose Github Private for version control as a local process. You can also run both side by side in one mcpServers block.

Which MCP server should you choose?

Atlassian MCP Server logoChoose Atlassian MCP Server when

  • You need dedicated capabilities in the Version Control domain.
  • You prefer a remote HTTP/SSE transport.
  • Its auth model fits you: other.
Explore Atlassian MCP Server

Github Private logoChoose Github Private when

  • You need dedicated capabilities in the Version Control domain.
  • You prefer a local stdio subprocess transport.
  • You want tools like gh_list_repos, gh_get_repo, gh_list_issues.
Explore Github Private

Feature & specification comparison

Rows where the two servers differ are marked.

SpecAtlassian MCP Server logoAtlassian MCP ServerGithub Private logoGithub Private
CategoryVersion ControlVersion Control
Quality signal80/100 · Excellent60/100 · Good
Install commandConfirmedConfirmed
TransportRemote HTTP/SSELocal subprocess (stdio)
AuthotherNot declared
PricingFreeNot declared
Required env varsNone listedNone listed
Verified owner VerifiedCommunity listing
GitHub stars1,1160
Directory activity 9 views 0 installs 1 upvotes 4 views 0 installs 0 upvotes
ToolsNot listed6

Tools & capabilities

Atlassian MCP Server tools

No tool names declared yet. Check the project README from the listing page.

Github Private tools 6

  • gh_list_reposList all your repositories including private ones. Returns repo names, URLs, descriptions, language, stars, and last update time.
  • gh_get_repoGet detailed info for a specific repository. Returns description, language, stars, forks, open issues, default branch, and access level.
  • gh_list_issuesList issues in a repository. Specify owner and repo name (e.g., owner='octocat', repo='Hello-World'). Returns titles, numbers, status, assignees, and labels.
  • gh_list_pullsList pull requests in a repository. Specify owner and repo name (e.g., owner='octocat', repo='Hello-World'). Returns titles, numbers, status, reviewers, and merge state.
  • gh_list_orgsList organizations you're a member of. Returns org names, URLs, and your role (owner, member, etc.).
  • gh_get_fileGet file contents from a repository. Specify owner, repo name, and file path (e.g., 'README.md'). Returns raw content and metadata.

Ready-to-paste client configs

Paste either block (or both) into your client config, e.g. claude_desktop_config.json or ~/.cursor/mcp.json. We only show a config when the install command is confirmed.

Atlassian MCP Server

mcpServers (Claude Desktop / Cursor)
{
  "mcpServers": {
    "atlassian-mcp-server": {
      "url": "https://mcp.atlassian.com/v2/mcp"
    }
  }
}

Github Private

mcpServers (Claude Desktop / Cursor)
{
  "mcpServers": {
    "github-private": {
      "command": "npx",
      "args": [
        "-y",
        "@pipeworx/mcp-github_private"
      ]
    }
  }
}

Frequently asked questions

Atlassian MCP Server is categorized under Version Control and uses a remote HTTP/SSE transport. Github Private belongs to Version Control and uses a local stdio subprocess. Pick Atlassian MCP Server for version control work and Github Private for version control.

Copy the mcpServers block from the config section on this page into your client's config (for example claude_desktop_config.json or ~/.cursor/mcp.json), then fully restart the client.

Atlassian MCP Server is listed as free. Auth: other. Github Private has no declared pricing — check the project's own site. If a server needs environment variables such as API keys, define them under the env key in your client's MCP config.

Yes. MCP clients support multiple servers: add atlassian-mcp-server and github-private as separate keys in the same mcpServers object, and your assistant will call tools from either one.

On AllMCPs, Atlassian MCP Server has a quality signal of 80/100 (Excellent) with 9 views, 0 installs and 1,116 GitHub stars. Github Private has 60/100 (Good) with 4 views, 0 installs and 0 GitHub stars.