Codebase Memory MCP vs MisakaNet

In-depth architectural comparison of the Codebase Memory MCP and MisakaNet MCP servers. Compare execution transports, security boundaries, tool capabilities, quality scores, and ready-to-paste client installation snippets for Claude, Cursor, Windsurf, and VS Code.

Which MCP Server Should You Choose?

Choose Codebase Memory MCP when:

• You need dedicated capabilities in the Knowledge & Memory domain.
• You prefer local stdio subprocess transport architecture.
• Your security boundary fits: No auth required (Free / Open Source).
• Primary tools included: index_repository, search_graph, query_graph.

Explore Codebase Memory MCP Details

Choose MisakaNet when:

• You need dedicated capabilities in the Knowledge & Memory domain.
• You prefer local stdio subprocess transport architecture.
• Your security boundary fits: No auth required (Free / Open Source).
• Primary tools included: BM25 and SAG-Lite lesson search, Git-backed failure-recovery knowledge base, MCP tools for searching and retrieving lessons.

Explore MisakaNet Details

Feature & Specification Comparison

Specification	Codebase Memory MCP DeusData Knowledge & Memory	MisakaNet Ikalus1988 Knowledge & Memory
Summary	Code-intelligence engine that indexes a repo into a persistent knowledge graph — functions, classes, call chains, HTTP routes, cross-service links. 159 languages via tree-sitter + Hybrid LSP, sub-ms structural queries, 99% fewer tokens than grep. Single static binary, zero dependencies, 100% local. npx codebase-memory-mcp	Agent failure memory network. Search 235+ verified debugging lessons from real engineering sessions. BM25 + SAG-Lite search, 3 tools (search, getlesson, submitusage), 5 resources, 3 guided prompts. Works with Claude Code, Cursor, and any MCP client. python3 scripts/mcpserver.py
Category & Scope

Tools & Capabilities Breakdown

Ready-to-Paste Client Configurations

Paste either (or both) of these JSON server blocks into your client config file (e.g. claude_desktop_config.json or ~/.cursor/mcp.json).

{
  "mcpServers": {
    "deusdata-codebase-memory-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "codebase-memory-mcp"
      ]
    }
  }
}

{
  "mcpServers": {
    "ikalus1988-misakanet": {
      "command": "npx",
      "args": [
        "-y",
        "@misaka-net/misakanet-setup"
      ]
    }
  }
}

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